Job Description P76553 Confidence 100.00% Date Thu Jan 5 12:24:31 GMT 2012 Rank 21 Aligned Residues 313 % Identity 18% Template d1ujna_ SCOP info Dehydroquinate synthase-like Dehydroquinate synthase-like Dehydroquinate synthase, DHQS Resolution 1.80

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		18	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		L	Q	R	V	.	K	T	F	S	V	P	P	V	T	L	C	G	P	G	S	V	S	S	C	G	Q	Q	A	Q	T	R	G	L	K	H	L	F	V	M	A	D	S	F	L	H	Q	A	G	M	T	A	G	L	T	R	S	L	T	V	K	G	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T	D	V	C
Query Conservation						.
Alig confidence						.																							.	.	.	.	.															.	.													.	.
Template Conservation																													.	.	.	.	.															.	.													.	.
Template Sequence		M	Q	R	L	E	V	R	E	P	V	P	Y	P	I	L	V	G	E	G	V	L	K	E	V	P	P	L	.	.	.	.	.	A	G	P	A	A	L	L	F	D	R	R	V	E	G	.	.	F	A	Q	E	V	A	K	A	L	G	V	R	.	.	H	L	L	G	L	P	G	G	E	A	A	K	S	L	E	V	Y	G
Template Known Secondary structure									S	S	S								S		G	G	G	G	S				.	.	.	.	.	S	S								G	G	G			.	.										T			.	.								S	G	G	G	S	S
Template Predicted Secondary structure																													.	.	.	.	.															.	.													.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		97	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure														.	.	.																																																		.	.
Query SS confidence														.	.	.																																																		.	.
Query Sequence		A	A	V	A	Q	L	R	E	S	G	C	D	.	.	.	G	V	I	A	F	G	G	G	S	V	L	D	A	A	K	A	V	T	L	L	V	T	N	P	D	S	T	L	A	E	M	S	E	T	S	V	L	Q	P	R	L	P	L	I	A	I	P	T	T	.	.	A	G	T	G	S	E	T	T	N	V	T	V	I	I
Query Conservation														.	.	.																																																		.	.
Alig confidence														.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	L	S	W	L	A	E	K	G	L	P	R	N	A	T	L	L	V	V	G	G	G	T	L	T	D	L	G	G	F	V	A	A	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	V	A	Y	L	A	F	P	T	T	T	L	A	I	V	D	A	S	V	G	G	K	T	G	I	N
Template Known Secondary structure											T			T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S						T	T	T	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		D	A	V	S	G	R	K	Q	V	L	A	H	A	S	L	M	P	D	V	A	I	L	D	A	A	L	T	E	G	V	P	S	H	V	T	A	M	T	G	I	D	A	L	T	H	A	I	E	A	Y	S	A	L	N	A	T	P	F	T	.	.	.	.	.	D	S	L	A	I	G	A	I	A	M	I	G	K	S	L	P
Query Conservation																																																													.	.	.	.	.
Alig confidence															.	.	.																																												.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		L	P	E	G	K	N	L	V	G	A	F	H	F	.	.	.	P	Q	G	V	Y	A	E	L	R	A	L	K	T	L	P	L	P	T	F	K	E	G	L	V	E	A	F	K	H	G	L	I	A	G	D	E	A	L	L	K	V	E	D	L	T	P	Q	S	P	R	L	E	A	F	L	A	R	A	V	A	V	K	V	R
Template Known Secondary structure			T	T											.	.	.		S						G	G	G	G	G	G	S																				T		G	G	G	G			T	T			T	T		T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		K	A	V	G	Y	G	H	D	L	A	A	R	E	S	M	L	L	A	S	C	M	A	G	M	A	F	S	S	A	G	L	G	L	C	H	A	M	A	H	Q	P	G	A	A	L	H	I	P	H	G	L	A	N	A	M	L	L	P	T	V	M	E	F	N	R	M	V	.	.	.	.	C	R	E	R	F	S	Q	I	G
Query Conservation																																																																					.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																			.	.																								.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		V	T	E	E	D	P	L	E	K	G	K	R	.	.	.	.	.	.	.	.	.	.	.	.	R	L	L	N	L	G	H	T	L	G	H	A	L	E	A	Q	T	R	.	.	H	A	L	P	H	G	M	A	V	A	Y	G	L	L	Y	A	A	L	L	G	R	A	L	G	G	E	D	L	L	P	P	V	R	R	L	L
Template Known Secondary structure							T	T	S	S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	T	T											T	T	.	.	T		S																				T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.													.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		R	A	L	R	T	K	K	S	D	D	R	D	A	I	N	A	V	S	E	L	I	A	E	V	G	I	G	K	R	L	G	D	V	.	.	.	G	A	T	S	A	H	Y	G	A	W	A	Q	A	A	L	E	D
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		L	W	L	S	P	P	P	L	P	P	L	A	F	E	D	L	L	P	Y	L	S	L	H	W	V	V	P	L	A	P	G	R	L	V	V	R	P	L	P	E	G	L	L	R	E	A	F	A	A	W	R	E	E
Template Known Secondary structure																		G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions