 |
Job Description | P76553 | Confidence | 28.65% | Date | Thu Jan 5 12:24:31 GMT 2012 |
Rank | 343 | Aligned Residues | 85 |
% Identity | 12% | Template | d1h7na_ |
SCOP info | TIM beta/alpha-barrel
| Aldolase
| 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
|
Resolution | 1.6 |
|
 |
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
. | . | . | 60 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . | . | . |
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
V | P | P | V | T | L | C | G | P | G | S | V | S | S | C | G | Q | Q | A | Q | T | R | G | L | K | H | L | F | V | M | A | . |
. |
. |
D | S | F | L | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
Q | A | G | M | T | A | G | L | T | R | S | L | T | V | K | G | I | A | M | T | L | W | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
| . | . | . |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|
|   |
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|   |
|
|
|
|   |
|   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |
|   |
|   |   |
|
|
|   |
|
|   |   |
|
|   |
|   |
|
|   |
|
|
|
|
|   |
|
|
|
Template Sequence |   |
L | P | N | I | N | R | I | G | V | N | R | L | K | D | Y | L | K | P | L | V | A | K | G | L | R | S | V | I | L | F | G | V | P | L | I | P | G | T | K | D | P | V | G | T | A | A | D | D | P | A | G | P | V | I | Q | G | I | K | F | I | R | E | Y | F | P | E | L | Y | I | I | C | D | V | C | L | C | E | Y | T | S |
Template Known Secondary structure |   |
S | T | T |
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
|
| S | T | T |
|
| B | T | T |
| G | G | G | G |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
| S | T | T | T | B | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | C | P | V | G | E | P | C | I | T | D | V | C | A | A | V | A | Q | L | R | E | S | G | C | D | G | V |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |
|   |
|   |
|
|
|   |
|   |
|
|
|
|
|
|
Template Sequence |   |
H | G | H | C | G | V | L | Y | D | D | G | T | I | N | R | E | R | S | V | S | R | L | A | A | V | A | V | N | Y | A | K | A | G | A | H | C | V |
Template Known Secondary structure |   |
T |
|
| S | S |
| B |
| T | T | S | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|