Job Description P76553 Confidence 61.02% Date Thu Jan 5 12:24:31 GMT 2012 Rank 188 Aligned Residues 85 % Identity 7% Template c3sajB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 1; PDBTitle: crystal structure of glutamate receptor glua1 amino terminal domain Resolution 2.50 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	C	G	P	G	S	V	S	S	C	G	Q	Q	A	Q	T	R	G	L	K	H	L	F	V	M	A	D	S	F	L	H	Q	A	G	M	T	A	G	L	T	R	S	L	T	V	K	G	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T	D	V	C	A	A	V	A	Q	L	R	E	S	G	C	D	G
Query Conservation
Alig confidence																																				.																								.	.
Template Conservation																																				.																								.	.
Template Sequence		L	Q	L	R	P	E	L	Q	E	A	L	I	S	I	I	D	H	Y	K	W	Q	T	F	V	Y	I	Y	D	A	D	R	G	L	S	.	V	L	Q	R	V	L	D	T	A	A	E	K	N	W	Q	V	T	A	V	N	I	L	T	.	.	T	T	E	E	G	Y	R	M	L	F	Q	D	L	E	K	K	K	E	R	L
Template Known Secondary structure					S															T														T	T	.													T								T	T	T	.	.																S	S	S
Template Predicted Secondary structure																																				.																								.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	F	G	G	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	D	C	E	S	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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