Job Description P76553 Confidence 96.96% Date Thu Jan 5 12:24:31 GMT 2012 Rank 25 Aligned Residues 104 % Identity 14% Template c3rggD_ PDB info PDB header:lyase Chain: D: PDB Molecule:phosphoribosylaminoimidazole carboxylase, pure protein; PDBTitle: crystal structure of treponema denticola pure bound to air Resolution 1.82 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		H	L	F	V	M	A	D	S	F	L	H	Q	A	G	M	T	A	G	L	T	R	S	L	T	V	K	G	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T	D	V	C	A	A	V	A	Q	L	R	E	S	G	.	C	D	G	V	I	A	F	G	G	G	S	V	L	D	A	A	K	A	V	T	L	L	V
Query Conservation																																																										.
Alig confidence											.																									.																						.														.
Template Conservation											.																									.																																				.
Template Sequence		L	V	I	I	L	M	G	S	S	.	S	D	M	G	H	A	E	K	I	A	S	E	L	K	T	F	G	I	E	Y	A	I	R	I	.	G	S	A	H	K	T	A	E	H	V	V	S	M	L	K	E	Y	E	A	L	D	R	P	K	L	Y	I	T	I	A	G	R	S	N	A	.	L	S	G	F	V	D	G	F	V
Template Known Secondary structure								S	S	G	.	G	G														T	T								.			T	T	T														T	S	S	S										S	S			.									S
Template Predicted Secondary structure											.																									.																																				.
Template SS confidence
		4	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	D	S	T	L	A	E	M	S	E	T	S	V	L	Q	P	R	L	P	L	I	A	I	P	T	T	A	G	T	G	S	E	T	T	N	V	T	V	I	I	D	A	V	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	A	T	I	A	C	P	P	P	S	D	S	F	A	G	A	D	I	Y	S	S	L	R	M	P	S	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S											G	G	G	G	G	G	G								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions