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Job DescriptionP76553
Confidence21.84%DateThu Jan 5 12:24:31 GMT 2012
Rank438Aligned Residues109
% Identity14%Templatec3q45E_
PDB info PDB header:isomeraseChain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  VMADSFLHQAGMTAGLTRSLTVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVTLLVTNPD
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Template Sequence  IMADESCCNS. . . FDAERLIQIQACDSFNLK. LSKSAGITNALNIIRLAEQAHMPVQVGGFLESRLGFTAAAHVALVSKT
Template Known Secondary structure  STT

S...TT

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   238.240....... ..250.........260..... ....270.........280.........290.........300.........310...
 
   134.....140......... 150.........160......
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Query Sequence  STLAEMSETSVLQPRL. . . . . . . . . . PLIAIPTTAGTGSETTN
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Template Sequence  ICYYDFDTPLMFEADPVRGGIVYQQRGIIEVPETAGLGAGYQK
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GGGGBSS

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GGG


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   314.....320.........330.........340.........350......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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