Job Description P76553 Confidence 28.58% Date Thu Jan 5 12:24:31 GMT 2012 Rank 346 Aligned Residues 95 % Identity 11% Template c3lutA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:voltage-gated potassium channel subunit beta-2; PDBTitle: a structural model for the full-length shaker potassium channel kv1.2 Resolution 2.90 Å

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		32	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.																.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure										.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	P	G	S	V	S	S	.	C	G	Q	Q	A	Q	T	R	G	.	.	L	K	H	L	F	V	M	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	L	H	Q	A	G	M	T	A	G	L	T	R	S	L	T	V	K	G	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T
Query Conservation										.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																																			.	.
Template Sequence		Y	A	A	G	K	A	E	V	V	L	G	N	I	I	K	K	K	G	W	R	R	S	S	L	V	I	T	T	K	I	F	W	G	G	K	A	E	T	E	R	G	L	S	R	K	H	I	I	E	.	.	G	L	K	A	S	L	E	R	L	Q	L	E	Y	V	D	V	V	F	A	N	R	P	D	P	N	T	P	M	E
Template Known Secondary structure		G	G	G	G														T			G	G	G								S	B			S	S	G	G	G	B	S	S								.	.										T		S								S	S			T	T	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	C	A	A	V	A	Q	L	R	E	S	G	C	D	G	V	I	A	F	G	G	G	S	V	L	D	A	A	K	A	V	T	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	V	R	A	M	T	H	V	I	N	Q	G	M	A	M	Y	W	G	T	S	R	W	S	S	M	E	I	M	E	A	Y	S	V	A
Template Known Secondary structure													T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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