Job Description P76553 Confidence 58.26% Date Thu Jan 5 12:24:31 GMT 2012 Rank 196 Aligned Residues 82 % Identity 11% Template c3afoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nadh kinase pos5; PDBTitle: crystal structure of yeast nadh kinase complexed with nadh Resolution 2.00 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																						.	100	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	H	L	F	V	M	A	D	S	F	L	H	Q	A	G	.	M	T	A	G	L	T	R	S	L	T	V	K	G	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T	D	V	C	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Q	L	R	E	S	G	C
Query Conservation																	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																				.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		Q	N	V	Y	I	T	K	K	P	W	T	P	S	T	R	E	A	M	V	E	F	I	T	H	L	H	E	S	Y	P	E	V	N	V	I	.	.	.	.	.	.	V	Q	P	D	V	A	E	E	I	S	Q	D	F	K	S	P	L	E	N	D	P	N	R	P	H	I	L	Y	T	G	P	E	Q	D	I	V	N	R	T
Template Known Secondary structure										T	T																				T	T					.	.	.	.	.	.										G	G	G			S		G	G	G		T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		108	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.
Predicted Secondary structure										.																																			.
Query SS confidence										.																																			.
Query Sequence		D	G	V	I	A	F	G	G	.	G	S	V	L	D	A	A	K	A	V	T	L	L	V	T	N	P	D	S	T	L	A	E	M	S	E	T	S	V	L	Q	P	R	L	.	P	L	I	A	I	P	T
Query Conservation										.																																			.
Alig confidence										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	L	V	T	L	G	G	D	G	T	I	L	H	G	V	S	M	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	Q	V	P	P	V	L	A	F	A	L
Template Known Secondary structure		S							S											T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																				.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions