Job Description P76553 Confidence 100.00% Date Thu Jan 5 12:24:31 GMT 2012 Rank 20 Aligned Residues 323 % Identity 13% Template c2gruB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-deoxy-scyllo-inosose synthase; PDBTitle: crystal structure of 2-deoxy-scyllo-inosose synthase2 complexed with carbaglucose-6-phosphate, nad+ and co2+ Resolution 2.15 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		P	V	T	L	C	G	P	G	S	V	S	S	C	G	Q	Q	A	Q	T	R	G	L	K	H	L	F	V	M	A	D	S	F	L	H	Q	A	G	M	T	A	G	L	T	R	S	L	T	V	K	G	.	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T	D	V	C	A	A	V	A	Q	L	R	E	S	G
Query Conservation																																																				.
Alig confidence																																						.														.
Template Conservation																																						.
Template Sequence		F	N	F	A	F	G	E	H	V	L	E	S	V	E	S	Y	I	P	R	D	E	F	D	Q	Y	I	M	I	S	D	S	G	V	P	D	S	.	I	V	H	Y	A	A	E	Y	F	G	K	L	A	P	V	H	I	L	R	F	Q	G	G	E	E	Y	K	T	L	S	T	V	T	N	L	Q	E	R	A	I	A	L	G
Template Known Secondary structure								T	T		G	G	G	G	G	G	T	S		S	S	S		S								T	T	S				.										T	T	T	S										S	G	G	G		B														T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		107	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		C	D	.	.	.	G	V	I	A	F	G	G	G	S	V	L	D	A	A	K	A	V	T	L	L	V	T	N	P	D	S	T	L	A	E	M	S	E	T	S	V	L	Q	P	R	L	P	L	I	A	I	P	T	T	A	G	T	G	S	E	T	T	N	V	T	V	I	I	D	A	V	S	G	R	K	Q	V	L	A	H
Query Conservation				.	.	.
Alig confidence				.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	R	R	T	A	I	V	A	V	G	G	G	L	T	G	N	V	A	G	V	A	A	G	M	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	G	I	A	L	I	H	V	P	T	T	F	L	A	A	S	D	S	V	L	S	I	K	Q	A	V	N	L	T	S	G	K	N	L	V	G	F
Template Known Secondary structure				T	T								S														G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G										S						T	T	T	S	S								T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	M	P	D	V	A	I	L	D	A	A	L	T	E	G	V	P	S	H	V	T	A	M	T	G	I	D	A	L	T	H	A	I	E	A	Y	S	A	L	N	A	T	P	F	T	D	S	L	A	I	G	A	I	A	M	I	G	K	S	L	P	K	A	V	G	Y	G	H	D	L	A	A	R	E	S	M	L	L
Query Conservation
Alig confidence				.																																											.	.
Template Conservation				.																																											.	.
Template Sequence		Y	Y	.	P	P	R	F	V	F	A	D	T	R	I	L	S	E	S	P	P	R	Q	V	K	A	G	M	C	E	L	V	K	N	M	L	I	L	E	N	D	N	K	E	F	T	.	.	E	D	D	L	N	S	A	N	V	Y	S	P	K	Q	L	E	T	F	I	N	F	C	I	S	A	K	M	S	V	L	S	E	D
Template Known Secondary structure				.			S											T	S																			S			S			S	S		.	.	G	G	G			S	S																								T	T
Template Predicted Secondary structure				.																																											.	.
Template SS confidence
		156	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.						.	.	330	.	.	.	.
Predicted Secondary structure																						.	.	.	.																																													.	.	.	.	.
Query SS confidence																						.	.	.	.																																													.	.	.	.	.
Query Sequence		A	S	C	M	A	G	M	A	F	S	S	A	G	L	G	L	C	H	A	M	.	.	.	.	A	H	Q	P	G	A	A	L	H	I	P	H	G	L	A	N	A	M	L	L	P	T	V	M	E	F	N	R	M	V	C	R	E	R	F	S	Q	I	G	R	A	L	R	T	.	.	.	.	.	K	K	S	D	D	R	D
Query Conservation																						.	.	.	.																																													.	.	.	.	.
Alig confidence																						.	.	.	.																																													.	.	.	.	.
Template Conservation
Template Sequence		I	Y	E	K	K	K	G	L	I	F	E	Y	G	H	T	I	G	H	A	I	E	L	A	E	Q	G	G	I	T	H	G	E	A	I	A	V	G	M	I	Y	A	A	K	I	A	N	R	M	N	L	M	P	E	H	D	V	S	A	H	Y	W	L	L	N	K	I	G	A	L	Q	D	I	P	L	K	S	D	P	D	S
Template Known Secondary structure		T	T	S	S	S	G	G	G	G	G	G	T	T											T	T	T	S	S																				T	T	S	S															T	T	T	T	S	S					S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		335	.	.	.	.	340	.											.	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		A	I	N	A	V	S	E	.	.	.	.	.	.	.	.	.	.	L	I	A	E	V	G	I	G	K	R	L	G	D	V	.	.	.	G	A	T	S	A	H	Y	G	A	W	A	Q	A	A	L
Query Conservation									.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		I	F	H	Y	L	I	H	D	N	D	E	D	N	L	G	M	I	L	L	S	G	V	G	K	P	A	M	Y	N	Q	T	L	L	T	P	V	R	K	T	L	I	K	E	V	I	R	E	G	L
Template Known Secondary structure													S										T	T					B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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