Job Description P76553 Confidence 100.00% Date Thu Jan 5 12:24:31 GMT 2012 Rank 12 Aligned Residues 335 % Identity 21% Template c1ta9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase from schizosaccharomyces2 pombe Resolution 1.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	Q	R	V	K	T	F	S	V	P	P	V	T	L	C	G	P	G	S	V	S	S	C	G	Q	Q	A	Q	T	R	G	L	K	H	L	F	V	M	A	D	S	F	L	H	Q	A	G	M	T	A	G	L	T	R	S	L	T	V	K	G	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T	D	V
Query Conservation
Alig confidence																																																		.																					.
Template Conservation																																																		.																					.
Template Sequence		F	E	E	S	K	D	R	I	F	T	S	P	Q	K	Y	V	Q	G	R	H	A	F	T	R	S	Y	M	Y	V	K	K	W	A	T	K	S	A	V	V	L	A	D	Q	N	V	W	N	I	.	C	A	N	K	I	V	D	S	L	S	Q	N	G	M	T	V	T	K	L	V	.	F	G	G	E	A	S	L	V	E	L
Template Known Secondary structure						S	S	B						S						T	T	G	G	G	G						T	T	T		S	S														.	T											T	T								.			S
Template Predicted Secondary structure																																																		.																					.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	A	V	A	Q	L	R	E	S	G	C	D	G	V	I	A	F	G	G	G	S	V	L	D	A	A	K	A	V	T	L	L	V	T	N	P	D	S	T	L	A	E	M	S	E	T	S	V	L	Q	P	R	L	P	L	I	A	I	P	T	T	A	G	T	G	S	E	T	T	N	V	T	V	I	I	D	A	V	S
Query Conservation
Alig confidence							.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	L	R	K	.	Q	C	P	D	D	T	Q	V	I	I	G	V	G	G	G	K	T	M	D	S	A	K	Y	I	A	H	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	P	S	I	I	C	P	T	T	A	S	S	D	A	A	T	S	S	L	S	V	I	Y	Q	F	Q	K
Template Known Secondary structure						T	.	T	S		T	T									S														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S		S		S		T	T		S
Template Predicted Secondary structure							.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.											.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	K	Q	V	L	A	H	A	S	L	M	P	D	V	A	I	L	D	A	A	L	T	E	G	V	P	S	H	V	T	A	M	T	G	I	D	A	L	T	H	A	I	E	A	Y	S	A	L	N	A	T	P	.	.	.	.	.	.	.	.	.	.	F	T	D	S	L	A	I	G	A	I	A	M	I	G	K	S	L
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		Y	S	F	Y	P	.	.	.	.	.	L	N	P	N	L	I	F	I	D	T	D	V	I	V	R	A	P	V	R	F	L	I	S	G	I	G	D	A	L	S	T	W	V	E	T	E	S	V	I	R	S	N	S	T	S	F	A	G	G	V	A	S	I	A	G	R	Y	I	A	R	A	C	K	D	T	L	E	K	Y	A
Template Known Secondary structure						S	.	.	.	.	.	S			S												S																									T	T				T	T	S	S	B
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		201	.	.	.	.						.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		246	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.															.																							.	.	.	.
Query SS confidence								.	.	.															.																							.	.	.	.
Query Sequence		P	K	A	V	G	Y	.	.	.	G	H	D	L	A	A	R	E	S	M	L	L	A	S	.	C	M	A	G	M	A	F	S	S	A	G	L	G	L	C	H	A	M	A	H	Q	P	.	.	.	.	G	A	A	L	H	I	P	H	G	L	A	N	A	M	L	L	P	T	V	M	E	F	N	R	M	V	C	R	E	R
Query Conservation								.	.	.															.																							.	.	.	.
Alig confidence								.	.	.															.																							.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		L	S	A	I	L	S	N	T	R	G	V	C	T	E	A	F	E	N	V	V	E	A	N	T	L	M	S	G	L	G	F	E	N	G	G	L	A	A	A	H	A	I	H	N	G	M	T	A	I	H	G	P	V	H	R	L	M	H	G	E	K	V	A	Y	G	T	L	V	Q	V	V	L	E	.	.	.	.	.	.	.
Template Known Secondary structure											T																							S	S													G	G	G		G	G	G	G	G	S																	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																											.	.	.																	.
Query SS confidence																																											.	.	.																	.
Query Sequence		F	S	Q	I	G	R	A	L	R	T	K	K	S	D	D	R	D	A	I	N	A	V	S	E	L	I	A	E	V	G	I	G	K	R	L	G	D	V	G	A	T	.	.	.	S	A	H	Y	G	A	W	A	Q	A	A	L	E	D	I	C	.	L	R	S	N	P	R	T	A	S	L	E	Q	I	V	G	L	Y	A	A
Query Conservation																																											.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	W	P	L	E	D	F	N	N	L	A	S	F	M	A	K	C	H	L	P	I	T	L	E	E	L	G	I	P	N	V	T	D	E	E	L	L	M	V	G	R	A	T	L	R	P	D	E	S	I	H	N	M	S	K	K	F	N	P	S	Q	I	A	D	A	I	K	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T																T	T				S					T		T	T														T		T	T	S	G	G	G	G	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		394	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		417	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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