Job Description P76553 Confidence 29.79% Date Thu Jan 5 12:24:31 GMT 2012 Rank 334 Aligned Residues 48 % Identity 17% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	F	V	M	A	D	S	F	L	H	Q	A	G	M	T	A	G	L	T	R	S	L	T	V	K	G	I	A	M	T	L	W	P	C	P	V	G	E	P	C	I	T	D	V	C	A	A	V	A	Q	L	R	E	S	G	C	D	G	V	I
Query Conservation
Alig confidence												.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		R	V	L	V	V	E	D	E	R	D	.	.	.	.	L	A	D	L	I	T	E	A	L	K	K	E	X	F	T	V	D	V	C	Y	.	.	.	.	.	.	.	.	.	D	G	E	E	G	X	Y	X	A	L	N	E	P	F	D	V	V	I
Template Known Secondary structure								S	S			.	.	.	.												T	T							S	.	.	.	.	.	.	.	.	.	S											S			S
Template Predicted Secondary structure												.	.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions