Return to main results Retrieve Phyre Job Id

Job DescriptionP60624
Confidence11.14%DateThu Jan 5 12:06:57 GMT 2012
Rank71Aligned Residues35
% Identity9%Templated1nlqa_
SCOP infoNucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like core domain Nucleoplasmin-like core domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.. .......80....... ..90......
Predicted Secondary structure 



.






.

Query SS confidence 










.














.








Query Sequence  EAAIQVSNVAI. FNAATGKADRVGFRF. EDGKKVRFF
Query Conservation 
 






 
.


   
 


    .
 
 



 
Alig confidence 










.














.








Template Conservation     





 

  

  
   
 
          
 
Template Sequence  GQKLVIKQILLGAEAKENEFNVVEVNTPKDSVQIPIA
Template Known Secondary structure 


TTS
BT
GGGT
Template Predicted Secondary structure 













Template SS confidence 




































   2930.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions