Job Description P60624 Confidence 35.79% Date Thu Jan 5 12:06:57 GMT 2012 Rank 35 Aligned Residues 44 % Identity 32% Template c4a1aP_ PDB info PDB header:ribosome Chain: P: PDB Molecule:60s ribosomal protein l21; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. Resolution 3.52 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.											.	.	20	.	.	.	.	.	.	.	.	.	30												.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	R	D	D	E	V	I	V	L	T	G	K	.	.	.	.	.	.	.	.	.	.	D	K	G	K	R	G	K	V	K	N	V	L	S	.	.	.	.	.	.	.	.	.	.	.	S	G	K	V	I	V	E	G	I	N	L	V	K	K	H	Q	K	P
Query Conservation															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	V	G	E	Y	V	D	I	M	V	D	G	S	Q	H	K	G	M	P	Y	K	L	Y	H	G	R	T	G	K	V	F	N	V	N	P	R	S	I	G	V	I	V	H	R	I	V	N	G	R	Y	I	E	K	R	L	H	V	K	I	E	H	V	R	P
Template Known Secondary structure				T	T									S	S			T	T				G	G	G	T	T										S	S											T	T											G	G	G
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions