 |
Job Description | P60624 | Confidence | 20.31% | Date | Thu Jan 5 12:06:57 GMT 2012 |
Rank | 43 | Aligned Residues | 27 |
% Identity | 33% | Template | c3qz9D_ |
PDB info |
PDB header:lyase | Chain: D: PDB Molecule:co-type nitrile hydratase beta subunit; |
PDBTitle: crystal structure of co-type nitrile hydratase beta-y215f from2 pseudomonas putida.
|
Resolution | 2.40 Å |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 20 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | K | I | R | R | D | D | E | V | I | V | L | T | G | K | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | G | K | R | G | K | V | K | N | V |
Query Conservation |   |
  |   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|
|   |
|   |
|   |   |   |
Template Sequence |   |
R | A | R | F | A | V | G | D | K | V | R | V | L | N | K | N | P | V | G | H | T | R | M | P | R | Y | T | R | G | K | V | G | T | V | V | I | D |
Template Known Secondary structure |   |
|
|
|
|
| T | T |
|  |  |  |  |
|
|
|
|
| S | S |
|
|
| S |
| G | G | G | T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|