Job Description P60624 Confidence 95.71% Date Thu Jan 5 12:06:57 GMT 2012 Rank 14 Aligned Residues 54 % Identity 28% Template c3p8bB_ PDB info PDB header:transferase/transcription Chain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5 Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		I	R	R	D	D	E	V	I	V	L	T	G	K	D	K	G	K	R	G	K	V	K	N	V	L	S	.	S	G	K	V	I	V	E	G	I	N	L	V	K	K	H	Q	K	P	V	P	A	L	N	Q	P	G	G	I	V	E	K	E	A	A	I	Q	V	S	N	V	A	I	F	N
Query Conservation																												.
Alig confidence																												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	P	G	D	L	V	E	V	I	A	G	P	F	K	G	Q	K	A	K	V	V	K	I	D	E	S	K	D	E	V	V	V	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	I	V	P	I	P	V	T	I	K	G	D	Y	V	R	L	I	S
Template Known Secondary structure				T	T							S	S	T	T	T	T										T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	S								G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions