Job Description P60624 Confidence 99.18% Date Thu Jan 5 12:06:57 GMT 2012 Rank 10 Aligned Residues 61 % Identity 33% Template c2zkrt_ PDB info PDB header:ribosomal protein/rna Chain: T: PDB Molecule:rna expansion segment es39 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																							.										.
Query SS confidence																							.										.
Query Sequence		A	A	K	I	R	R	D	D	E	V	I	V	L	T	G	K	D	K	G	K	R	.	G	K	V	K	N	V	L	S	S	.	G	K	V	I	V	E	G	I	N	L	V	K	K	H	Q	K	P	V	P	A	L	N	Q	P	G	G	I	V	E	K	E	A	A	I	Q	V	S	N	V	A	I	F	N
Query Conservation																							.										.
Alig confidence																							.										.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	M	P	I	R	K	D	D	E	V	Q	V	V	R	G	H	Y	K	G	Q	Q	I	G	K	V	V	Q	V	Y	R	K	K	Y	V	I	Y	I	E	R	V	Q	R	E	K	A	N	G	T	.	.	.	.	.	.	.	.	.	.	.	.	T	V	H	V	G	I	H	P	S	K	V	V	I	T	R
Template Known Secondary structure				B			T	T							S	S	T	T	T	T			S								T	T	T	T					T	T						S	S			.	.	.	.	.	.	.	.	.	.	.	.						B		G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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