Job Description P60624 Confidence 9.13% Date Thu Jan 5 12:06:57 GMT 2012 Rank 91 Aligned Residues 45 % Identity 36% Template c2zkrq_ PDB info PDB header:ribosomal protein/rna Chain: Q: PDB Molecule:rna expansion segment es31 part ii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		5	.	.	.	.	10	.	.	.	.	.											.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	R	D	D	E	V	I	V	L	T	.	.	.	.	.	.	.	.	.	.	G	K	D	K	G	K	R	G	K	V	K	N	V	L	S	S	G	K	V	I	.	.	.	.	.	.	.	.	.	.	.	V	E	G	I	N	L	V	K	K	H	Q	K	P	V
Query Conservation													.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	K	G	D	I	V	D	I	K	G	M	G	T	V	Q	K	G	M	P	H	K	C	Y	H	G	K	T	G	R	V	Y	N	V	T	Q	H	A	V	G	I	I	V	N	K	Q	V	K	G	K	I	L	A	K	R	I	N	V	R	I	E	H	I	K	H	S
Template Known Secondary structure				T	T									T	T			S	S				G	G	G	T	T										S	S	S										S	S			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions