Return to main results Retrieve Phyre Job Id

Job DescriptionP60624
Confidence96.18%DateThu Jan 5 12:06:57 GMT 2012
Rank11Aligned Residues36
% Identity19%Templatec2kvqG_
PDB info PDB header:transcriptionChain: G: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of nuse:nusg-ctd complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30 .......
Predicted Secondary structure 












.

Query SS confidence 




























.






Query Sequence  AAKIRRDDEVIVLTGKDKGKRGKVKNVLS. SGKVIVE
Query Conservation    





 
 








 
 

 
  .   



Alig confidence 




























.






Template Conservation     
  

 
 
  


 
  
 
  
   
 

 
 
Template Sequence  KTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVS
Template Known Secondary structure 




TT
SSTTTTTTTT
Template Predicted Secondary structure 

















Template SS confidence 




































   125....130.........140.........150.........160.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions