 |
Job Description | P60624 | Confidence | 78.61% | Date | Thu Jan 5 12:06:57 GMT 2012 |
Rank | 28 | Aligned Residues | 29 |
% Identity | 31% | Template | c2e70A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt5; |
PDBTitle: solution structure of the fifth kow motif of human2 transcription elongation factor spt5
|
Resolution | UNK |
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | E | V | I | V | L | T | G | K | D | K | G | K | R | G | K | V | K | N | V | L | S | S | G | K | V | I | V | E |
Query Conservation |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |
|   |
|
|
|   |   |
|   |
|
|
|   |
| . |   |   |   |   |
|
|
|
Template Sequence |   |
G | Q | T | V | R | I | S | Q | G | P | Y | K | G | Y | I | G | V | V | K | D | A | T | . |
E | S | T | A | R | V | E |
Template Known Secondary structure |   |
T | S |  |  |  |  |
| S | S | T | T | T | T |
|  |  |  |  |  |  |  |
| . | S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
707 | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | |
. | 730 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|