Job Description P05704 Confidence 84.02% Date Thu Jan 5 10:58:48 GMT 2012 Rank 9 Aligned Residues 149 % Identity 13% Template d2liga_ SCOP info Four-helical up-and-down bundle Aspartate receptor, ligand-binding domain Aspartate receptor, ligand-binding domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		S	S	A	L	A	G	Y	F	L	W	Q	A	D	R	D	Q	R	D	V	T	A	E	I	E	I	R	T	G	L	A	N	S	S	D	F	L	R	S	A	R	I	N	M	I	Q	A	G	A	.	.	.	.	A	S	R	I	A	E	M	E	A	M	K	R	N	I	A	Q	A	E	S	E	I	K	Q	S	Q	Q	G	Y
Query Conservation																																																		.	.	.	.
Alig confidence																																																		.	.	.	.
Template Conservation
Template Sequence		M	G	G	L	L	F	S	S	L	Q	H	C	Q	Q	G	F	V	I	S	N	E	L	R	Q	Q	Q	S	E	L	T	S	T	W	D	L	M	L	Q	T	R	I	N	L	S	R	S	A	A	R	M	M	M	D	A	S	N	Q	Q	S	S	A	K	T	D	L	L	Q	N	A	K	T	T	L	A	Q	A	A	A	H	Y
Template Known Secondary structure					S	S	S	S	S																																											T	S			S	T	T		S			S		T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Y	Q	N	R	P	V	K	T	P	A	D	E	A	L	D	T	E	L	N	Q	R	F	Q	A	Y	I	T	G	M	Q	P	M	L	K	Y	A	K	N	G	M	F	E	A	I	I	N	H	E	S	E	Q	I	R	P	L	D	N	A	Y	T	D	I	L	N	K	A	V	K	I	R	S	T
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		A	N	F	K	N	M	T	P	L	P	A	M	A	E	A	S	A	N	.	V	D	E	K	Y	Q	R	Y	Q	A	A	L	A	E	L	I	Q	F	L	D	N	G	N	M	D	A	Y	F	A	Q	P	T	Q	G	M	Q	N	A	L	G	E	A	L	G	N	Y	A	R	V	S	E	N	L	Y	R
Template Known Secondary structure							S				G	G	G							.																					T	T								S
Template Predicted Secondary structure																				.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions