Job Description P05704 Confidence 17.58% Date Thu Jan 5 10:58:48 GMT 2012 Rank 36 Aligned Residues 110 % Identity 12% Template d1eq1a_ SCOP info Apolipophorin-III Apolipophorin-III Apolipophorin-III Resolution UNK

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		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		A	A	V	E	A	A	R	A	G	E	Q	G	R	G	F	A	V	V	A	S	E	V	R	T	L	A	S	R	S	A	Q	A	A	K	E	I	E	G	L	I	S	E	S	V	R	L	I	D	L	G	S	D	E	V	A	T	A	.	G	K	T	M	S	T	I	V	D	A	V	A	S	V	T	H	I	M	Q	E	I	A
Query Conservation																																																											.
Alig confidence																													.																														.
Template Conservation																													.
Template Sequence		F	E	E	M	E	K	H	A	K	E	F	Q	K	T	F	S	E	Q	F	N	S	L	V	N	S	K	N	.	T	Q	D	F	N	K	A	L	K	D	G	S	D	S	V	L	Q	Q	L	S	A	F	S	S	S	L	Q	G	A	I	S	D	A	N	G	K	A	K	E	A	L	E	Q	A	R	Q	N	V	E	K	T	A
Template Known Secondary structure		S	T																					T	S	S			.	S	S		S	S																										T	T		S	S	T
Template Predicted Secondary structure																													.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		469	470	.									.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		A	A	S	.	.	.	.	.	.	.	.	D	E	Q	S	R	G	I	T	Q	V	S	Q	A	I	S	E	M	D	K	V	T	Q	Q	N	A	S	L	V	E
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	L	R	K	A	H	P	D	V	E	K	E	A	N	A	F	K	D	K	L	Q	A	A	V	Q	T	T	V	Q	E	S	Q	K	L	A	K	E	V	A
Template Known Secondary structure			G	G	G	G		S						T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions