Job Description P05704 Confidence 9.93% Date Thu Jan 5 10:58:48 GMT 2012 Rank 67 Aligned Residues 105 % Identity 10% Template c3c98B_ PDB info PDB header:endocytosis/exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: revised structure of the munc18a-syntaxin1 complex Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Q	A	A	K	E	I	E	G	L	I	S	E	S	V	R	L	I	D	L	G	S	D	E	V	A	T	A	G	K	T	M	S	T	I	V	D	A	V	A	S	V	T	H	I	M	Q	E	I	A	A	A	S	D	E	Q	S	R	G	I	T	Q	V	S	Q	A	I	S	E	M	D	K	V	T	Q	Q	N	A	S	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		R	F	M	D	E	F	F	E	Q	V	E	E	I	R	G	F	I	D	K	I	A	E	N	V	E	E	V	K	R	K	H	S	A	I	L	A	S	P	N	P	D	E	K	T	K	E	E	L	E	E	L	M	S	D	I	K	K	T	A	N	K	V	R	S	K	L	K	S	I	E	Q	S	I	E	Q	E	E	G	L	N
Template Known Secondary structure			T	T																																	T		S	S			S																																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
			498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	V	E	E	A	S	A	A	A	V	S	L	E	E	Q	A	A	R	L	T	E	A	V	D	V	F	R
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		R	S	S	A	D	L	R	I	R	K	T	Q	H	S	T	L	S	R	K	F	V	E	V	M	S	E	Y	N
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions