Return to main results Retrieve Phyre Job Id

Job DescriptionP05704
Confidence28.20%DateThu Jan 5 10:58:48 GMT 2012
Rank32Aligned Residues46
% Identity20%Templatec3b5nE_
PDB info PDB header:membrane proteinChain: E: PDB Molecule:synaptobrevin homolog 1; PDBTitle: structure of the yeast plasma membrane snare complex
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   479480.........490.........500.........510.........520....
Predicted Secondary structure 
Query SS confidence 













































Query Sequence  TQVSQAISEMDKVTQQNASLVEEASAAAVSLEEQAARLTEAVDVFR
Query Conservation   

            
 
    
       
   
  
   
  

Alig confidence 













































Template Conservation 


   
 


 

  

 


 





 
  

  
   
  
 
Template Sequence  AELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 













































   30.........40.........50.........60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions