Job Description P05704 Confidence 9.27% Date Thu Jan 5 10:58:48 GMT 2012 Rank 87 Aligned Residues 88 % Identity 14% Template c1s94A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:s-syntaxin; PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei Resolution 3.34 Å

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		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500						.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		I	D	L	G	S	D	E	V	A	T	A	G	K	T	M	S	T	I	V	D	A	V	A	S	V	T	H	I	M	Q	E	I	A	A	A	S	D	E	Q	S	R	G	I	T	Q	V	S	Q	A	I	S	E	M	D	K	V	T	Q	Q	N	A	S	L	V	E	.	.	.	.	.	E	A	S	A	A	A	V	S	L	E
Query Conservation																																																																			.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.
Template Conservation
Template Sequence		M	E	E	F	F	E	Q	V	E	E	I	R	A	M	I	D	K	I	S	D	N	V	D	A	V	K	K	K	H	S	D	I	L	S	M	K	E	E	L	E	E	L	M	T	D	I	K	R	T	A	N	K	V	R	G	K	L	K	T	I	E	L	N	I	E	Q	E	E	S	A	D	L	R	I	R	K	T	Q	Y	S
Template Known Secondary structure																																																																				T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	A	R	L	T	E	A	V	D	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	S	R	K	F	V	E	V	M	S	D	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions