 |
Job Description | P0AEH1 | Confidence | 98.67% | Date | Thu Jan 5 11:23:20 GMT 2012 |
Rank | 68 | Aligned Residues | 74 |
% Identity | 18% | Template | d2f0aa1 |
SCOP info | PDZ domain-like
| PDZ domain-like
| PDZ domain
|
Resolution | 1.80 |
|
 |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
. | . | . | . | 260 | . | . | . | . | . | . | . | |
|
. | . | 270 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
K | E | D | P | V | S | S | L | G | I | R | P | R | G | P | Q | I | . |
. |
. |
. |
. |
E | P | V | L | E | N | V | Q | P | N | S | A | A | S | K | A | G | . |
L | Q | A | G | D | R | I | V | K | V | D | G | Q | P | L | T | . |
. |
Q | W | V | T | F | V | M | L | V | R | D | N | . |
. |
P | G | K | S | L | A | L | E |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
| . |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   | . | . |   |   |   |   |
|   |   |   |
|   |   |   | . | . |   |
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
N | X | E | K | Y | N | F | L | G | I | S | I | V | G | Q | S | N | E | R | G | D | G | G | I | Y | I | G | S | I | X | K | G | G | A | V | A | A | D | G | R | I | E | P | G | D | X | L | L | Q | V | N | D | I | N | F | E | N | X | S | N | D | D | A | V | R | V | L | R | D | I | V | H | K | P | G | P | I | V | L | T |
Template Known Secondary structure |   |
|  |  |  |  |
| S |
|
|  |  |  |  |
|
|
|
| T | T | S |
|
|
|  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |
  |   |
276 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
I | E | R | Q |
Query Conservation |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |
|   |
Template Sequence |   |
V | A | K | L |
Template Known Secondary structure |   |
 |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
Template SS confidence |   |
|
|
|
|
  |   |
338 | . | 340 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|