 |
Job Description | P0AEH1 | Confidence | 98.66% | Date | Thu Jan 5 11:23:20 GMT 2012 |
Rank | 71 | Aligned Residues | 84 |
% Identity | 14% | Template | d1be9a_ |
SCOP info | PDZ domain-like
| PDZ domain-like
| PDZ domain
|
Resolution | 1.82 |
|
 |
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
|
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | L | R | H | W | A | F | E | P | D | K | E | D | P | V | S | S | L | G | I | R | P | R | G | P | Q | I | E | P | V | L | E | N | V | Q | P | N | S | A | A | S | K | A | G | . |
L | Q | A | G | D | R | I | V | K | V | D | G | Q | P | L | T | Q | . |
. |
W | V | T | F | V | M | L | V | R | D | N | P | G | K | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
| . |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   | . | . |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   | . |   |   |   |   |   |
Template Sequence |   |
I | P | R | E | P | R | R | I | V | I | H | R | G | S | T | G | L | G | F | N | I | I | G | G | E | D | G | E | G | I | F | I | S | F | I | L | A | G | G | P | A | D | L | S | G | E | L | R | K | G | D | Q | I | L | S | V | N | G | V | D | L | R | N | A | S | H | E | Q | A | A | I | A | L | K | . |
N | A | G | Q | T |
Template Known Secondary structure |   |
|
|
| S |
|  |  |  |  |  |  |
| T | T | S |
|
|
|  |  |  |  |  |
| S | T | T |
|
|  |  |  |  |  |  |
| T | T | S |  |  |  |  |  | T |
|
|
| T | T |  |  |  |  |  |  | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  | . | T | S |
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | |
. | . | . | . | . |
  |
  |   |
272 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | L | E | I | E | R | Q |
Query Conservation |   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |
Template Sequence |   |
V | T | I | I | A | Q | Y | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
386 | . | . | . | 390 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|