Job Description P0AEH1 Confidence 99.71% Date Thu Jan 5 11:23:20 GMT 2012 Rank 6 Aligned Residues 153 % Identity 22% Template c2qt5A_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:glutamate receptor-interacting protein 1; PDBTitle: crystal structure of grip1 pdz12 in complex with the fras12 peptide Resolution 2.30 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		P	G	V	R	P	V	V	G	E	I	A	A	N	S	I	A	A	E	A	Q	.	I	A	P	G	T	E	L	K	A	V	D	G	I	E	T	P	D	W	D	A	V	R	L	Q	L	V	D	K	I	G	D	E	S	T	T	I	T	V	A	P	F	G	S	D	Q	R	R	D	V	K	L	D	L	R	H	W	A	F	E
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		K	D	G	K	P	R	V	S	N	L	R	Q	G	G	I	A	A	R	S	D	Q	L	D	V	G	D	Y	I	K	A	V	N	G	I	N	L	A	K	F	R	H	D	E	I	I	S	L	L	K	N	V	G	E	R	V	V	L	E	V	E	Y	E	L	P	P	V	S	I	Q	G	S	S	V	M	F	R	T	V	E	V
Template Known Secondary structure		S	S	S		S							T	T	S					T	T	S			T	T							T	T				T	T	S											T			S																		S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.								.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																						.																			.	.
Query SS confidence																	.	.	.	.	.	.	.																						.																			.	.
Query Sequence		P	D	K	E	D	P	V	S	S	L	G	I	R	P	R	.	.	.	.	.	.	.	G	P	Q	I	E	P	V	L	E	N	V	Q	P	N	S	A	A	S	K	A	G	.	L	Q	A	G	D	R	I	V	K	V	D	G	Q	P	L	T	Q	W	.	.	V	T	F	V	M	L	V	R	D	N	P	G	K	S	L	A
Query Conservation																	.	.	.	.	.	.	.																						.																			.	.
Alig confidence								.									.	.	.	.	.	.	.																						.																			.	.											.
Template Conservation								.																																																																				.
Template Sequence		T	L	H	K	E	G	.	N	T	F	G	F	V	I	R	G	G	A	H	D	D	R	N	K	S	R	P	V	V	I	T	C	V	R	P	G	G	P	A	D	R	E	G	T	I	K	P	G	D	R	L	L	S	V	D	G	I	R	L	L	G	T	T	H	A	E	A	M	S	I	L	K	Q	C	.	G	Q	E	A	T
Template Known Secondary structure						B	T	.	T	B		S									S	S	T	T	T											T	T	S										T	T							T	T				T	T												T	T	.		S
Template Predicted Secondary structure								.																																																																				.
Template SS confidence
		154	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.
		274	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	E	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	I	E	Y	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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