Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEH1
Confidence98.49%DateThu Jan 5 11:23:20 GMT 2012
Rank148Aligned Residues80
% Identity21%Templatec2q9vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the c890s mutant of the 4th pdz domain of human2 membrane associated guanylate kinase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   199200.........210....... ..220.........230......... 240.........250...... ...260....... ..270.
Predicted Secondary structure 












...











.









..
.


Query SS confidence 


















. . .





















.
















. .










.



Query Sequence  HWAFEPDKEDPVSSLGIRP. . . RGPQIEPVLENVQPNSAASKAG. LQAGDRIVKVDGQPLTQ. . WVTFVMLVRDN. PGKS
Query Conservation                

   ...        
  
   


  

.
  

 
  


  
  ..   
   
   . 
  
Alig confidence 


















...





















.
















..










.



Template Conservation 
 
  
 
 
   


  
 
      

 
  
   
 
   
 
  

 

 


  
      

   
        
Template Sequence  SMEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGH
Template Known Secondary structure 

BTTB


SSTTS

TTS



TT
TT
TTS
T
Template Predicted Secondary structure 





































Template SS confidence 















































































   837..840.........850.........860.........870.........880.........890.........900.........910......
 
   272......
Predicted Secondary structure 
Query SS confidence 






Query Sequence  LALEIER
Query Conservation 
 
 
 
Alig confidence 






Template Conservation 
 
 
 
Template Sequence  VNLTVRQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   917..920...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions