 |
Job Description | P0AEH1 | Confidence | 98.81% | Date | Thu Jan 5 11:23:20 GMT 2012 |
Rank | 38 | Aligned Residues | 80 |
% Identity | 25% | Template | c2krgA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf1; |
PDBTitle: solution structure of human sodium/ hydrogen exchange2 regulatory factor 1(150-358)
|
Resolution | UNK |
|
 |
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
|
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | W | A | F | E | P | D | K | E | D | P | V | S | S | L | G | I | R | P | R | G | P | Q | I | E | P | V | L | E | N | V | Q | P | N | S | A | A | S | K | A | G | L | Q | A | G | D | R | I | V | K | V | D | G | Q | P | L | T | Q | . |
. |
W | V | T | F | V | M | L | V | R | D | N | P | G | K | S | L | A | L | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
|
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   | . | . |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|   |
| . |   |   |   |
|   |
|   |
Template Sequence |   |
R | P | R | L | C | T | M | K | K | G | P | S | G | Y | G | F | N | L | H | S | D | K | S | K | P | G | Q | F | I | R | S | V | D | P | D | S | P | A | E | A | S | G | L | R | A | Q | D | R | I | V | E | V | N | G | V | C | M | E | G | K | Q | H | G | D | V | V | S | A | I | R | A | G | . |
G | D | E | T | K | L | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| S | S | S | S |
|  |  |  |
|
|
| S | S | S |
| S |
| B |  |  |  |  |
| T | T | S |  |  |  |  |  | T |
|
| T | T |
| B |
|
|  |  | T | T |  |  |
| T | T |
|
| T |  |  |  |  |  |  |  |  |  |  | . |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
. | . | . | . | . | . | . |
  |
  |   |
276 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
I | E | R |
Query Conservation |   |
|   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |
|
Template Sequence |   |
V | V | D |
Template Known Secondary structure |   |
 |
|
|
Template Predicted Secondary structure |   |
 |  |
|
Template SS confidence |   |
|
|
|
  |   |
230 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|