 |
Job Description | P0AEH1 | Confidence | 98.40% | Date | Thu Jan 5 11:23:20 GMT 2012 |
Rank | 177 | Aligned Residues | 74 |
% Identity | 15% | Template | c2ejyA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:55 kda erythrocyte membrane protein; |
PDBTitle: solution structure of the p55 pdz t85c domain complexed2 with the glycophorin c f127c peptide
|
Resolution | UNK |
|
 |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | |
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | |
|
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | P | V | S | S | L | G | I | R | P | . |
R | G | P | Q | I | E | P | V | L | E | N | V | Q | P | N | S | A | A | S | K | A | G | . |
L | Q | A | G | D | R | I | V | K | V | D | G | Q | P | L | T | Q | W | . |
. |
V | T | F | V | M | L | V | R | D | N | P | G | K | S | L | A | L | E | I | E | R | Q | G | S |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
| . |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   |   | . | . |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |
|   |
|   |
|   |
|   |   |
|
Template Sequence |   |
K | V | T | E | E | P | M | G | I | C | L | K | L | N | E | K | Q | S | C | T | V | A | R | I | L | H | G | G | M | I | H | R | Q | G | S | L | H | V | G | D | E | I | L | E | I | N | G | T | N | V | T | N | H | S | V | D | Q | L | Q | K | A | M | K | E | T | K | G | M | . |
I | S | L | K | V | I | P | N | Q | Q |
Template Known Secondary structure |   |
 |
| S | S | S |
|
| S |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |
| S | S | S |  |  |  |  |  | T |
|
|
| T | T |
|  |  |  |  |  | T | T | B |
|
|
| S | S |
| S |  |  |  |  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
. | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|