 |
Job Description | P0AEH1 | Confidence | 98.57% | Date | Thu Jan 5 11:23:20 GMT 2012 |
Rank | 115 | Aligned Residues | 84 |
% Identity | 24% | Template | c2dm8A_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:inad-like protein; |
PDBTitle: solution structure of the eighth pdz domain of human inad-2 like protein
|
Resolution | UNK |
|
 |
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | H | W | A | F | E | P | D | K | E | D | P | V | S | S | L | G | I | R | P | R | . |
. |
. |
. |
G | P | Q | I | E | P | V | L | E | N | V | Q | P | N | S | A | A | S | K | A | G | . |
L | Q | A | G | D | R | I | V | K | V | D | G | Q | P | L | T | . |
. |
Q | W | V | T | F | V | M | L | V | R | D | N | P | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |
|
| . |
|   |   |
|
|   |
|   |   |
|
|
|   |   |
|   | . | . |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   | . |   |
Template Sequence |   |
V | P | G | Q | E | M | I | I | E | I | S | K | G | R | S | G | L | G | L | S | I | V | G | G | K | D | T | P | L | N | A | I | V | I | H | E | V | Y | E | E | G | A | A | A | R | D | G | R | L | W | A | G | D | Q | I | L | E | V | N | G | V | D | L | R | N | S | S | H | E | E | A | I | T | A | L | R | Q | T | . |
P |
Template Known Secondary structure |   |
| T | T | S |
|  |  |  |  |  |  |
|
| S | S |
|
|
|
|
|
| B |
|
| T | T | S | S |
| S | S |  |  |
|
|
|
|
| S | S | S |  |  |  |  |  | T |
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  | T |
| . |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. |
  |
  |   |
270 | . | . | . | . | . | . | . | . | . | 280 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | S | L | A | L | E | I | E | R | Q | G | S |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |
|   |   |   |
Template Sequence |   |
Q | K | V | R | L | V | V | Y | R | D | E | A |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|