Job Description P0AEH1 Confidence 98.61% Date Thu Jan 5 11:23:20 GMT 2012 Rank 91 Aligned Residues 83 % Identity 19% Template c2dkrA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:lin-7 homolog b; PDBTitle: solution structure of the pdz domain from human lin-72 homolog b Resolution UNK

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																							.																			.	.
Query SS confidence																								.	.	.																							.																			.	.
Query Sequence		D	L	R	H	W	A	F	E	P	D	K	E	D	P	V	S	S	L	G	I	R	P	.	.	.	R	G	P	Q	I	E	P	V	L	E	N	V	Q	P	N	S	A	A	S	K	A	G	.	L	Q	A	G	D	R	I	V	K	V	D	G	Q	P	L	T	Q	W	.	.	V	T	F	V	M	L	V	R	D	N	P	G
Query Conservation																								.	.	.																							.																			.	.
Alig confidence																								.	.	.																							.																			.	.										.
Template Conservation																																																																															.
Template Sequence		G	S	S	G	S	S	G	V	V	E	L	P	K	T	D	E	G	L	G	F	N	I	M	G	G	K	E	Q	N	S	P	I	Y	I	S	R	V	I	P	G	G	V	A	D	R	H	G	G	L	K	R	G	D	Q	L	L	S	V	N	G	V	S	V	E	G	E	Q	H	E	K	A	V	E	L	L	K	A	.	A	Q
Template Known Secondary structure				S	S		S									T	T									S	S	S	S	S										T	T	S										T	T		B					T	T				T	T	S												.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.
		270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	A	L	E	I	E	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	V	K	L	V	V	R	S	G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions