Job Description P0AEH1 Confidence 98.92% Date Thu Jan 5 11:23:20 GMT 2012 Rank 32 Aligned Residues 140 % Identity 22% Template c1z87A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:alpha-1-syntrophin; PDBTitle: solution structure of the split ph-pdz supramodule of alpha-2 syntrophin Resolution UNK

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	A	Q	I	A	P	G	T	E	L	K	A	V	D	G	I	E	T	P	D	W	D	A	V	R	L	Q	L	V	D	K	I	G	D	E	S	T	T	I	T	V	A	P	F	G	S	D	Q	R	R	D	V	K	L	D	L	R	H	W	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	G	R	R	A	P	R	T	G	L	L	E	L	R	C	G	A	G	S	G	A	G	G	E	R	W	Q	R	V	L	L	S	L	A	E	D	A	L	T	V	S	P	A	D	G	E	P	G	P	E	P	E	P	A	Q	L	N	G	A	A	E	P	G	A	A	P	P	Q	L	P	E	A	L	L	L	Q	R	R	R
Template Known Secondary structure					S													S	T	T	S			S	S												S	S										S			S		S	S					S		S		S	S	S	S	S		S					T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																					.																		.	.
Query SS confidence																			.	.	.																					.																		.	.
Query Sequence		E	P	D	K	E	D	P	V	S	S	L	G	I	R	P	R	G	.	.	.	P	Q	I	E	P	V	L	E	N	V	Q	P	N	S	A	A	S	K	A	G	.	L	Q	A	G	D	R	I	V	K	V	D	G	Q	P	L	T	Q	.	.	W	V	T	F	V	M	L	V	R	D	N	P	G	K	S	L	A	L	E	I
Query Conservation																			.	.	.																					.																		.	.
Alig confidence																			.	.	.																					.																		.	.												.
Template Conservation																																																																									.
Template Sequence		V	T	V	R	K	A	D	A	G	G	L	G	I	S	I	K	G	G	R	E	N	K	M	P	I	L	I	S	K	I	F	K	G	L	A	A	D	Q	T	E	A	L	F	V	G	D	A	I	L	S	V	N	G	E	D	L	S	S	A	T	H	D	E	A	V	Q	A	L	K	K	T	.	G	K	E	V	V	L	E	V
Template Known Secondary structure						T	T	T	T											T	T	T	T										T	T	S						T	T			S	S							S	S		B		T	T	S													.		S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160
		277	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Q	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	M	K	E
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions