Job Description P0AEH1 Confidence 99.75% Date Thu Jan 5 11:23:20 GMT 2012 Rank 4 Aligned Residues 156 % Identity 17% Template c1p1dA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:glutamate receptor interacting protein; PDBTitle: structural insights into the inter-domain chaperoning of2 tandem pdz domains in glutamate receptor interacting3 proteins Resolution UNK

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		P	G	V	R	P	V	V	G	E	I	A	A	N	S	I	A	A	E	A	Q	.	I	A	P	G	T	E	L	K	A	V	D	G	I	E	T	P	D	W	D	A	V	R	L	Q	L	V	D	K	I	G	D	E	S	T	T	I	T	V	A	P	F	G	S	D	Q	R	R	D	V	K	L	D	L	R	H	W	A	F	E
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		L	S	S	P	P	L	I	S	Y	I	E	A	D	S	P	A	E	R	C	G	V	L	Q	I	G	D	R	V	M	A	I	N	G	I	P	T	E	D	S	T	F	E	E	A	N	Q	L	L	R	D	S	S	I	T	S	K	V	T	L	E	I	E	F	D	V	A	E	S	V	I	P	S	S	G	T	F	H	V	K	L
Template Known Secondary structure			S		S								T	T	S					T	S				S	S							T	T	B		S	T	T	S											T			S	S	S										S		S			B			S	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																.																					.	.
Query SS confidence																					.	.	.																.																					.	.
Query Sequence		P	D	K	E	D	P	V	S	S	L	G	I	R	P	R	G	P	Q	I	.	.	.	E	P	V	L	E	N	V	Q	P	N	S	A	A	S	K	.	A	G	L	Q	A	G	D	R	I	V	K	V	D	G	Q	P	L	T	Q	W	.	.	V	T	F	V	M	L	V	R	D	N	P	G	K	S	L	A	L	E	I	E
Query Conservation																					.	.	.																.																					.	.
Alig confidence																					.	.	.																.																					.	.											.
Template Conservation																																																																								.
Template Sequence		P	K	K	H	S	V	E	L	G	I	T	I	S	S	P	S	S	R	K	P	G	D	P	L	V	I	S	D	I	K	K	G	S	V	A	H	R	T	G	T	L	E	L	G	D	K	L	L	A	I	D	N	I	R	L	D	S	C	S	M	E	D	A	V	Q	I	L	Q	Q	C	.	E	D	L	V	K	L	K	I	R
Template Known Secondary structure					S	S										S		S	S	S	T	T										S	S	S					T	S				T	T							T	T			G	G	G														.	T	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.
		278	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	E	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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