 |
Job Description | P77515 | Confidence | 2.03% | Date | Thu Jan 5 12:30:11 GMT 2012 |
Rank | 88 | Aligned Residues | 14 |
% Identity | 29% | Template | c3ngbI_ |
PDB info |
PDB header:viral protein/immune system | Chain: I: PDB Molecule:envelope glycoprotein gp160; |
PDBTitle: crystal structure of broadly and potently neutralizing antibody vrc012 in complex with hiv-1 gp120
|
Resolution | 2.68 Å |
|
  |   |
104 | . | . | . | . | |
|
. | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  | . | . |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | S | G | Y | . |
. |
A | L | M | Q | G | Q | T | F | D |
Query Conservation |   |
  |
|   |
|   | . | . |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
Template Sequence |   |
T | P | A | G | Y | V | I | L | K | C | N | D | K | N | F | N |
Template Known Secondary structure |   |
|
| T | T |  |  |  |  |  |  |
|
| T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|