 |
Job Description | P77515 | Confidence | 1.88% | Date | Thu Jan 5 12:30:11 GMT 2012 |
Rank | 96 | Aligned Residues | 32 |
% Identity | 22% | Template | c1ciiA_ |
PDB info |
PDB header:transmembrane protein | Chain: A: PDB Molecule:colicin ia; |
PDBTitle: colicin ia
|
Resolution | 3.00 Å |
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | P | P | A | E | F | Y | P | V | G | A | P | I | P | W | P | S | D | T | V | P | S | G | Y | A | L | M | Q | G | Q | T | F | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|   |
Template Sequence |   |
V | N | P | P | R | V | D | V | F | H | G | T | P | P | A | W | S | S | F | G | N | K | T | I | W | . |
. |
G | G | N | E | W | V | D |
Template Known Secondary structure |   |
S | S |
|
|
|
|
|
|
|
|
|
|
|
|
|
| S | G | G | G | G |
|
| T | T | . | . | S | S |
| T | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
. | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|