Job Description P46850 Confidence 100.00% Date Thu Jan 5 12:04:22 GMT 2012 Rank 2 Aligned Residues 380 % Identity 31% Template c2epgB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ttha1785; PDBTitle: crystal structure of ttha1785 Resolution 2.10 Å

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		3	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.							20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70
Predicted Secondary structure										.	.										.	.	.	.	.	.																																													.	.	.	.
Query SS confidence										.	.										.	.	.	.	.	.																																													.	.	.	.
Query Sequence		Y	E	L	L	T	T	E	N	.	.	A	P	V	K	M	W	T	K	G	.	.	.	.	.	.	V	P	V	E	A	D	A	R	Q	Q	L	I	N	T	A	K	M	P	F	I	F	K	H	I	A	V	M	P	D	V	H	L	G	K	G	S	T	I	G	S	V	I	P	T	.	.	.	.	K	G	A	I	I	P	A
Query Conservation										.	.										.	.	.	.	.	.																																													.	.	.	.
Alig confidence										.	.										.	.	.	.	.	.																																													.	.	.	.
Template Conservation
Template Sequence		Y	R	I	P	R	Q	G	K	X	R	V	D	A	V	F	F	A	S	K	E	I	L	K	D	L	E	A	E	N	Y	A	S	L	Q	Q	L	X	N	V	A	T	L	P	G	I	V	E	P	A	L	A	X	P	D	I	H	W	G	Y	G	F	P	I	G	G	V	A	A	F	D	P	E	E	G	G	V	V	S	P	G
Template Known Secondary structure								T	T		S	S																	T	T	T										T	T	S	T	T	B		S												S	S	S										G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.												.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	G	V	D	I	G	C	G	M	N	A	L	R	T	A	L	T	A	E	D	L	P	E	N	L	A	E	L	R	Q	A	I	E	T	A	V	P	H	G	R	T	T	G	R	C	K	R	D	K	G	A	W	E	N	P	.	.	.	.	.	.	.	.	.	.	.	P	V	N	V	D	A	K	W	A	E	L	E	A
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	F	D	I	N	C	G	V	R	L	L	A	S	H	L	T	L	E	D	L	L	P	R	Q	K	E	L	A	D	A	L	Y	R	L	V	P	S	G	R	D	V	R	F	S	K	R	E	L	K	E	I	L	K	E	G	A	G	W	L	V	K	R	G	Y	G	Y	P	E	D	V	R	F	I	E	S	Q	G	R
Template Known Secondary structure					S	S	T	T																G	G	G												S																				T							T	T	S	S		G	G	G	G	G	G	B	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.															.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	Q	W	L	T	Q	K	Y	P	R	F	L	N	T	N	N	Y	K	H	L	G	T	L	G	T	G	N	H	F	I	E	I	C	L	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	Q	V	W	I	M	L	H	S	G	S	R	G	I	G	N	A	I	G	T	Y	F	I	D	L	A	Q	K
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	W	A	N	P	D	K	V	S	E	R	A	F	E	R	G	A	P	Q	I	G	T	L	G	S	G	N	H	F	L	E	V	Q	Y	V	D	E	V	Y	D	E	E	A	A	L	A	F	G	L	F	K	G	Q	V	T	V	L	I	H	T	G	S	R	G	L	G	H	Q	V	C	Q	D	Y	V	E	R	F	L	K
Template Known Secondary structure			T	T			G	G	G	S									G	G	G	T	T				S	T	T												S									T			T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	Q	E	T	L	E	T	L	P	S	R	D	L	A	Y	F	M	E	G	T	E	Y	F	D	D	Y	L	K	A	V	A	W	A	Q	L	F	A	S	L	N	R	D	A	M	M	E	N	V	V	T	A	L	Q	S	I	T	Q	K	T	V	R	Q	P	Q	T	L	A	M	E	E	I	N	C	H	H	N	Y	V	Q
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence		V	A	P	R	Y	G	I	E	L	V	D	K	Q	L	A	A	A	P	I	K	S	P	E	G	Q	D	Y	L	Q	A	X	A	A	A	A	N	F	A	F	A	N	R	Q	L	I	A	H	F	V	R	E	A	F	E	K	V	G	F	T	P	R	.	.	.	D	H	G	L	R	V	L	Y	D	L	A	H	N	N	A	K
Template Known Secondary structure						T	T				S	S	G	G	G					T	T	S																																			T	T					.	.	.												S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.														.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		K	E	Q	H	F	G	E	E	I	Y	V	T	R	K	G	A	V	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	Q	Y	G	I	I	P	G	S	M	G	A	K	S	F	I	V	R	G	.	.	L	G	N	E	E	S	F	C	S	C	S	H	G	A	G	R	V	M	S	R	T	K	A	K	K
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		F	E	E	H	R	G	R	R	V	L	V	H	R	K	G	A	T	R	A	F	G	P	G	H	P	E	V	P	E	E	Y	R	R	V	G	Q	P	V	L	V	P	G	D	X	G	R	Y	S	Y	V	L	A	G	T	E	K	A	X	E	V	S	F	G	S	S	C	H	G	A	G	R	N	L	V	K	E	L	A	E	R
Template Known Secondary structure						T	T									S							T	T		T	T	S		G	G	G	T	T	T									S	T	T	S															S	S	S						S					T	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		L	F	S	V	E	D	Q	I	R	A	T	A	H	V	E	C	R	K	D	A	E	V	I	D	E	I	P	M	A	Y	K	D	I	D	A	V	M	A	A	Q	.	.	S	D	L	V	E	V	I	Y	T	L	R	Q	V	V	C	V	K	G
Query Conservation																																										.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	R	A	A	T	D	V	S	L	V	V	E	A	V	E	G	A	G	I	G	K	K	V	A	R	L	R	P	L	I	V	V	K	G
Template Known Secondary structure		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		427	.																								.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.