Job Description P76298 Confidence 9.84% Date Thu Jan 5 12:21:40 GMT 2012 Rank 76 Aligned Residues 42 % Identity 29% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.						.	.	.	.	.	.	.	.	530	.	.								.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		Q	E	A	Q	Q	L	L	D	R	V	A	Q	E	M	P	.	.	.	.	.	K	L	T	E	D	L	V	P	G	V	V	.	.	.	.	.	.	.	T	L	T	T	L	H	K	V	L	Q	N	L	L	D	E	K
Query Conservation																	.	.	.	.	.												.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	V	V	S	K	I	A	Q	Y	K	Q	E	C	P	S	I	F	A	W	E	I	R	D	R	L	L	S	E	G	V	C	T	N	D	N	I	P	S	V	S	S	I	N	R	V	L	R	N	L	A	S	E	K
Template Known Secondary structure																T	T													T	T	S	S		T	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions