Job Description P76298 Confidence 8.55% Date Thu Jan 5 12:21:40 GMT 2012 Rank 94 Aligned Residues 102 % Identity 22% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.									.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.
Query Sequence		V	V	E	A	S	T	V	V	A	T	H	L	N	H	L	I	S	Q	H	A	A	E	L	F	G	R	Q	E	A	Q	Q	L	L	D	R	V	A	Q	E	M	P	K	L	T	E	D	L	V	P	G	V	V	T	L	T	T	L	H	K	V	L	Q	N	L	L	D	E	K	V	P	I	.	.	.	.	.	.	.	.	R
Query Conservation																																																																									.	.	.	.	.	.	.	.
Alig confidence																																														.	.			.																							.	.	.	.	.	.	.	.
Template Conservation																																														.	.			.
Template Sequence		V	V	D	D	E	A	N	I	V	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	A	T	N	G	A	Q	A	L	D	R	A	R	E	T	R	P	D	A	V	.	.	I	L	.	D	V	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A	D	G	I	D	A	P	A	L	F	L	T	A	R	D
Template Known Secondary structure					S															T	T							S	S														S			.	.			.					S	S												T	T											S	T
Template Predicted Secondary structure																																														.	.			.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		553	.	.	.	.	.	.	560	.					.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		D	M	R	T	I	L	E	T	L	.	.	.	.	A	E	H	A	P	I	Q	S	D	P	H	E	L	T	A	V	V	R	V	A	L	G	R	A
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	V	T	K	P	F	S	L	E	E	V	V	A	R	L	R	V	I	L	R	R	A
Template Known Secondary structure		T									T	S	T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions