Job Description P76298 Confidence 100.00% Date Thu Jan 5 12:21:40 GMT 2012 Rank 4 Aligned Residues 312 % Identity 36% Template c3mixA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: crystal structure of the cytosolic domain of b. subtilis flha Resolution 2.30 Å

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		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	K	P	V	K	M	A	E	N	N	T	V	V	E	A	T	W	N	D	V	Q	L	E	D	S	L	G	M	E	V	G	Y	R	L	I	P	M	V	D	F	Q	Q	D	G	E	L	L	G	R	I	R	S	I	R	K	K	F	A	Q	E	M	G	F	L	P	P	V	V	H	I	R	D	N	M	D	L	Q	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	L	E	E	E	A	E	V	D	E	L	K	S	P	E	S	V	V	Q	L	L	H	I	D	P	I	E	F	E	F	G	Y	G	L	I	P	L	A	D	A	N	Q	G	G	D	L	L	D	R	I	V	M	I	R	R	Q	L	A	L	E	L	G	L	V	I	P	V	V	R	I	R	D	N	I	A	L	Q	P	N
Template Known Secondary structure											S				S					G	G	G	S				S							G	G	G						S	S	S																				S												T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	R	I	L	M	K	G	V	E	I	G	S	G	D	A	Y	P	G	R	W	L	A	I	N	P	G	T	A	A	G	T	L	P	G	E	A	T	V	D	P	A	F	G	L	N	A	I	W	I	E	S	A	L	K	E	Q	A	Q	I	Q	G	Y	T	V	V	E	A	S	T	V	V	A	T	H	L	N	H	L	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	R	L	K	I	K	G	N	E	V	A	K	G	E	L	L	L	D	H	Y	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	V	D	P	A	S	V	V	S	T	H	I	T	E	K	I
Template Known Secondary structure								T	T										T	T			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420																																									.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	H	A	A	E	L	F	G	R	Q	E	A	Q	Q	L	L	D	R	V	A	Q	E	M	P	K	L	T	E	D	L	V	P	G	V	V	T	L	T	T	L	H	K	V	L	Q	N	L	L	D	E	K	V	P	I	R	D	M	R	T	I	L	E	T	L	A	E	H	A	P	I	Q	S	D	P	H	E	L	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	H	A	H	E	L	I	G	R	Q	E	T	K	Q	L	I	D	H	L	K	E	S	Y	P	V	L	V	E	E	V	T	P	N	P	L	S	V	G	D	I	Q	K	V	L	A	K	L	L	K	E	K	V	S	I	R	N	L	V	T	I	F	E	T	L	A	D	Y	G	K	L	T	T	D	S	D	L	L	T	E
Template Known Secondary structure																																	T	T	T	T																T	T																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	R	V	A	L	G	R	A	I	T	Q	Q	W	F	P	G	K	D	E	V	H	V	I	G	L	D	T	P	L	E	R	L	L	L	Q	A	L	Q	G	G	G	G	L	E	P	G	L	A	D	R	L	L	A	Q	T	Q	E	A	L	S	R	Q	E	M	L	G	A	P	P	V	L	L	V	N	H	A	L	R	P
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		Y	T	R	Q	A	L	A	K	Q	I	T	A	Q	F	A	K	E	N	E	V	L	K	V	V	T	C	S	G	R	V	E	K	A	I	A	D	G	V	Q	.	Y	L	S	L	E	P	D	I	S	E	S	I	V	R	S	V	A	K	E	A	E	Q	L	S	L	R	Q	E	T	A	I	L	L	C	S	P	P	V	R	M
Template Known Secondary structure							T											T	T	S					B														B		.		B																								T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	R	F	L	R	R	S	L	P	Q	L	V	V	L	S	N	L	E	L	S	D	N	R	H	I	R	M	T	A	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	K	Q	L	L	E	R	Y	F	P	D	L	P	V	L	S	Y	N	E	L	E	A	N	V	E	V	Q	S	I	G	V	V
Template Known Secondary structure								T	T	T		T	T						G	G	G	S		T	T						S
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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