Job Description P76298 Confidence 100.00% Date Thu Jan 5 12:21:40 GMT 2012 Rank 3 Aligned Residues 327 % Identity 22% Template c2x49A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva Resolution 1.50 Å

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		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	V	Q	L	E	D	S	L	G	M	E	V	G	Y	R	L	I	P	M	V	D	F	Q	Q	D	G	E	L	L	G	R	I	R	S	I	R	K	K	F	A	Q	E	M	G	F	L	P	P	V	V	H	I	R	D	N	M	D	L	Q	P	A	R	Y	R	I	L	M	K	G	V	E	I	G	S	G	D	A	Y	P
Query Conservation
Alig confidence																											.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		S	H	M	T	E	T	V	P	L	I	L	L	V	P	K	S	R	R	E	D	L	E	K	A	Q	.	.	.	.	.	.	L	A	E	R	L	R	S	Q	F	F	I	D	Y	G	V	R	L	P	E	V	L	L	R	D	G	E	G	L	D	D	N	S	I	V	L	L	I	N	E	I	R	V	E	Q	F	T	V	Y	F
Template Known Secondary structure							T																		T	T	.	.	.	.	.	.														S	S											T	T			T	T							T	T										T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.							.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	W	L	A	I	N	P	G	T	A	A	G	T	L	P	G	E	A	T	V	D	P	A	F	G	L	N	A	I	W	I	E	S	A	L	K	E	Q	A	Q	I	Q	G	Y	T	V	V	E	A	S	T	V	V	A	T	H	L	N	H	L	I	S	Q	H	A	A	E	L	F	G	R	Q	E	A	Q	Q	L	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	M	R	V	V	N	Y	S	D	E	V	V	S	F	G	I	N	P	T	I	H	Q	Q	G	S	S	Q	Y	F	W	V	T	H	E	E	G	E	K	L	R	E	L	G	Y	V	L	R	N	A	L	D	E	L	Y	H	C	L	A	V	T	L	A	R	N	V	N	E	Y	F	G	I	Q	E	T	K	H	M	L	D
Template Known Secondary structure		T	S				T	T			T					T	T									T	T																T	T	T																					T	G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	Q	E	M	P	K	L	T	E	D	L	V	P	G	V	V	T	L	T	T	L	H	K	V	L	Q	N	L	L	D	E	K	V	P	I	R	D	M	R	T	I	L	E	T	L	A	E	H	A	P	I	Q	S	D	P	H	E	L	T	A	V	V	R	V	A	L	G	R	A	I	T	Q	Q	W	F	P	G	K
Query Conservation
Alig confidence																	.																																																															.
Template Conservation																	.																																																															.
Template Sequence		Q	L	E	A	K	F	P	D	L	L	K	E	V	L	R	.	H	A	T	V	Q	R	I	S	E	V	L	Q	R	L	L	S	E	R	V	S	V	R	N	M	K	L	I	M	E	A	L	A	L	W	A	P	R	E	K	D	V	I	N	L	V	E	H	I	R	G	A	M	A	R	Y	I	C	H	K	F	A	N	.	G
Template Known Secondary structure					T	T										T	.	T	S														T	T	T																	T	T	T															T										T	.	T
Template Predicted Secondary structure																	.																																																															.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.		.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.		.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.						.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		D	E	V	H	V	I	G	L	D	T	P	L	E	R	L	L	L	Q	A	L	Q	G	G	G	.	.	.	.	.	G	L	E	P	G	L	A	D	R	L	L	A	Q	T	Q	E	A	L	S	R	Q	E	M	L	G	A	P	P	V	L	L	V	N	H	A	L	R	P	L	L	S	R	F	L	R	R	S	L	P	Q	L
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.
Template Conservation
Template Sequence		G	E	L	R	A	V	M	V	S	A	E	V	E	D	V	I	R	K	G	I	R	Q	T	S	G	S	T	F	L	S	L	D	P	E	A	S	A	N	L	M	D	L	I	T	L	K	L	D	D	L	L	I	A	H	K	D	L	V	L	L	T	S	V	D	V	R	R	F	I	K	K	M	I	E	G	R	F	P	D	L
Template Known Secondary structure		S																							S	S																							T	T			S		G	G	G							T	T	T									T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	S	N	L	E	L	S	D	N	R	H	I	R	M	T	A	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	L	S	F	G	E	I	A	D	S	K	S	V	N	V	I	K	T	I
Template Known Secondary structure						T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions