Job Description P76298 Confidence 14.86% Date Thu Jan 5 12:21:40 GMT 2012 Rank 35 Aligned Residues 135 % Identity 17% Template c1vj7B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. Resolution 2.10 Å

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		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	T	V	V	A	T	H	L	N	H	L	I	S	Q	H	A	A	E	L	F	G	R	Q	E	A	Q	Q	L	L	D	R	V	A	Q	E	M	P	K	L	T	E	D	L	V	P	G	V	V	T	L	T	T	L	H	K	V	L	Q	N	L	L	D	E	K	V	P	I	R	D	M	R	T	I	L	E	T	L	A
Query Conservation
Alig confidence																				.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	V	T	V	A	C	G	F	L	H	D	V	V	E	D	T	D	.	.	.	I	T	L	D	N	I	E	F	.	.	.	D	F	G	K	D	V	R	D	I	V	D	G	V	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	K	V	E	S	K	D	I	R	V	I	L	V	K	L	A
Template Known Secondary structure			S									T	T					S	S	.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																				.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.							.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		E	H	A	P	I	Q	S	D	P	H	E	L	T	A	V	V	R	V	A	L	G	R	A	I	T	Q	Q	W	F	P	G	K	D	E	V	H	V	I	G	L	D	T	P	L	E	R	L	L	L	Q	A	L	Q	G	G	G	.	.	.	.	.	.	G	L	E	P	G	L	A	D	R	L	L	A	Q	T	Q	E	A	L
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	L	H	N	M	R	T	L	K	H	L	R	K	D	K	Q	E	R	I	S	R	E	T	M	E	I	Y	A	P	L	A	H	R	L	G	I	S	R	I	K	W	E	L	E	D	L	A	F	R	Y	L	N	E	T	E	F	Y	K	I	S	H	M	M	N	E	K	L	V	D	D	I	V	T	K	I	K	S	Y	T
Template Known Secondary structure									T	G	G	G	S															T								T	T																													T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		637	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions