 |
Job Description | Q46908 | Confidence | 34.09% | Date | Thu Jan 5 12:35:46 GMT 2012 |
Rank | 98 | Aligned Residues | 94 |
% Identity | 17% | Template | d1v4va_ |
SCOP info | UDP-Glycosyltransferase/glycogen phosphorylase
| UDP-Glycosyltransferase/glycogen phosphorylase
| UDP-N-acetylglucosamine 2-epimerase
|
Resolution | 1.80 |
|
 |
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | A | Q | R | K | N | G | T | P | M | S | L | T | A | L | S | M | G | D | E | R | A | L | H | W | L | R | Y | L | M | A | L | G | F | E | E | A | V | L | L | E | T | A | A | D | L | R | F | A | P | E | F | V | A | R | H | I | A | E | . |
. |
. |
W | Q | H | Q | N | P | L | D | L | I | I | T | G | C | Q | S | S |
Query Conservation |   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   | . | . | . |   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
| . |   |
|
|   |
|   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |   | . | . | . |   |   |
Template Sequence |   |
Y | L | A | L | R | G | I | P | G | . |
L | K | P | L | V | L | L | T | G | Q | H | . |
R | E | Q | L | R | Q | A | L | S | L | F | G | I | Q | E | D | R | N | L | D | V | X | Q | E | R | Q | A | L | P | D | L | A | A | R | I | L | P | Q | A | A | R | A | L | K | E | X | G | A | D | Y | V | L | V | . |
. |
. |
H | G |
Template Known Secondary structure |   |
 |  |  |  |  | T | S | T | T | . |  |  |  |  |  |  |  |
| S | S |
| . |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
| S |  |  |
|
|
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | . | . | . |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
. | . |
  |
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | Q | N | G | Q | T | P | F | L | L | A | E | M | L | G | W | P | C | F | T | Q |
Query Conservation |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |   |
Template Sequence |   |
D | T | L | T | T | F | A | V | A | W | A | A | F | L | E | G | I | P | V | G | H | V |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|