 |
Job Description | Q46908 | Confidence | 22.45% | Date | Thu Jan 5 12:35:46 GMT 2012 |
Rank | 135 | Aligned Residues | 71 |
% Identity | 7% | Template | d1tv5a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.40 |
|
 |
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | A | A | L | L | L | A | Q | R | K | N | G | T | P | M | S | L | T | A | L | S | M | G | D | E | R | A | L | H | W | L | R | Y | L | M | A | L | G | F | E | E | A | V | L | L | E | T | A | A | D | L | R | F | A | . |
P | E | F | V | A | R | H | I | A | E | W | Q | H | Q | N | P | L | D |
Query Conservation |   |
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
| . |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   | . | . |   |
|
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
S | T | K | F | I | C | E | M | Y | N | Y | T | N | K | . |
. |
Q | I | P | I | I | A | S | G | G | I | F | S | G | L | D | A | L | E | K | I | E | A | G | A | S | V | C | Q | L | Y | S | C | L | V | F | N | G | M | K | S | A | V | Q | I | K | R | E | L | N | H | L | L | Y | Q | R | G | Y | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . |
| S |
|  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | |
|
. | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|