 |
Job Description | Q46908 | Confidence | 32.46% | Date | Thu Jan 5 12:35:46 GMT 2012 |
Rank | 100 | Aligned Residues | 76 |
% Identity | 13% | Template | d1hg3a_ |
SCOP info | TIM beta/alpha-barrel
| Triosephosphate isomerase (TIM)
| Triosephosphate isomerase (TIM)
|
Resolution | 2.7 |
|
 |
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | L | R | S | L | L | G | A | D | E | Q | A | A | A | A | L | L | L | A | Q | R | K | N | G | T | P | M | S | L | T | A | L | S | M | G | D | E | R | A | L | H | W | L | R | Y | L | M | A | L | G | F | E | E | A | V | L | L | E | T | A | A | D | L | R | F | A | P | E | F | V | A | R | H | I | A | E | W | Q |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . |
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|
| . |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
G | T | G | I | P | V | S | K | A | K | P | E | V | I | T | N | T | V | E | L | V | K | K | V | N | P | E | V | K | V | . |
. |
L | C | G | A | G | I | S | T | G | E | D | V | K | K | A | I | E | L | G | T | V | . |
G | V | L | L | A | S | G | V | T | K | A | K | D | P | E | K | A | I | W | D | L | V | S | G | I |
Template Known Secondary structure |   |
T | T | S |
|
| T | T | T | S |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  | . | . |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S | . |  |  |  |  | S |  |  |  |  | T |
| S | S |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|