|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | I | L | L | A | F | K | A | E | P | D | A | G | M | L | A | E | K | E | W | Q | A | A | A | Q | G | K | S | G | P | D | I | S | L | L | R | S | L | L | G | A | D | E | Q | A | A | A | A | L | L | L | A | Q | R | K | N | G | T | P | M | S | L | T | A | L | S | M | G | D | E | R | A | L | H | W | L | R | Y | L |
Query Conservation |   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|   |
|
|
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |
|
|   |
|
|
|   |   |   |
|   | . |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
Template Sequence |   |
L | R | V | L | V | A | V | K | R | V | I | D | Y | A | . |
. |
. |
. |
V | K | I | R | V | K | P | D | R | T | G | V | V | T | D | G | V | K | H | S | M | N | P | F | C | E | I | A | V | E | E | A | V | R | L | K | E | K | K | L | V | K | . |
E | V | I | A | V | S | C | G | P | A | Q | C | Q | E | T | I | R | T | A |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |
| T | T | . | . | . | . | S |
|
|
| B |
| T | T | S | S | S | B |
|
| T | T |
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | . |  |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
|
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | L | G | F | E | E | A | V | L | L | E | T | A | A | D | L | R | F | A | . |
. |
P | E | F | V | A | R | H | I | A | E | W | Q | H | Q | N | P | L | D | L | I | I | T | G | C | Q | S | S | E | G | Q | N | G | Q | T | P | F | L | L | A | E | M | L | G | W | P | C | F | T | Q | V | E | R | F | T | L | D | A | L |
Query Conservation |   |
|
|   |
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
| . | . |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
L | A | M | G | A | D | R | G | I | H | V | E | V | P | P | A | E | A | E | R | L | G | P | L | Q | V | A | R | V | L | A | K | L | A | E | K | E | K | V | D | L | V | L | L | G | K | Q | A | I | D | D | D | C | N | Q | T | G | Q | M | T | A | G | F | L | D | W | P | Q | G | T | F | A | S | Q | V | T | L | E | G | D |
Template Known Secondary structure |   |
 |  |  | T |
| S |  |  |  |  |  |  |
|
|  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | S |
|
| T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | I | T | L | E | Q | R | T | E | H | G | L | R | C | C | R | V | R | L | P | A | V | I | A | V | R | Q | C | G | E | V | A | L | P | V | P | G | M | R | Q | R | M | A | A | G | K | A | E | I | I | R | K | T | V | A | A | E | . |
. |
. |
. |
M | P | A | M | Q | C | L | Q | L | A | R | A | E | Q | R | R | G | A | T |
Query Conservation |   |
  |
|   |
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|
| . |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
K | L | K | V | E | R | E | I | D | G | G | L | E | T | L | R | L | K | L | P | A | V | V | T | A | . |
D | L | R | L | N | E | P | R | Y | A | T | L | P | N | I | M | K | A | K | K | K | K | I | E | V | I | K | P | G | D | L | G | V | D | L | T | S | K | L | S | V | I | S | V | E | D | P | P | Q | R | T | A | G | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  | . |
| G | G | G |
|
|
|
|
|
|
|  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |
|  |  |  |  | T |
|
|
|
|
| S |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
  |
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | D | G | Q | T | V | A | E | K | A | Q | K | L | W | Q | D | Y | L | R |
Query Conservation |   |
  |
|
|
|   |   |   |   |
|   |
|   |
|
|   |
|   |   |
|
|
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |
|   | . | . |   |   |   |
|   |   |   |   |
|   |
| . |   |   |   |
Template Sequence |   |
K | V | E | . |
. |
T | T | E | D | L | V | A | K | L | K | E | . |
I | G | R |
Template Known Secondary structure |   |
|
| S | . | . | S |  |  |  |  |  |  |  |  |  |  | . | T | T |
|
Template Predicted Secondary structure |   |
 |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  | . |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | |
|
. | . | . | . | . | . | . | . | . | 250 | . | |
. | . | . |
  |