Job Description Q46908 Confidence 28.97% Date Thu Jan 5 12:35:46 GMT 2012 Rank 110 Aligned Residues 94 % Identity 11% Template c3s3tD_ PDB info PDB header:chaperone Chain: D: PDB Molecule:nucleotide-binding protein, universal stress protein uspa PDBTitle: universal stress protein uspa from lactobacillus plantarum Resolution 1.90 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																		.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		L	G	A	D	E	Q	A	A	A	A	L	L	L	A	Q	R	K	N	G	T	P	M	S	L	T	A	L	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	R	A	L	H	W	L	R	Y	L	M	.	.	.	.	.	.	.	.	.	A	L	G	F	E	E	A	V	L	L	E	T
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence																						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		S	D	A	A	Q	A	A	F	T	E	A	V	N	I	A	Q	R	H	Q	A	.	.	N	L	T	A	L	Y	V	V	D	D	S	A	Y	H	T	P	A	L	D	P	V	L	S	E	L	L	D	A	E	A	A	H	A	K	D	A	X	R	Q	R	Q	Q	F	V	A	T	T	S	A	P	N	L	K	T	E	I	S	Y
Template Known Secondary structure		S																		T		.	.																G	G	G																												T	S	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	D	L	R	F	A	P	E	F	V	A	R	H	I	A	E	W	Q	H	Q	N	P	L	D	L	I	I	T	G	C	Q	S	S	E	G	Q	N	G	Q	T	P	F	L	L	A	E	M	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.
Template Sequence		G	I	P	K	.	.	.	.	.	.	.	H	T	I	E	D	Y	A	K	Q	H	P	E	I	D	L	I	V	L	G	A	T	G	T	N	S	P	H	R	V	A	V	G	S	T	T	S	Y	V
Template Known Secondary structure		S				.	.	.	.	.	.	.										S	T	T								S			S	S		T	T	T		S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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