Job Description Q46908 Confidence 83.10% Date Thu Jan 5 12:35:46 GMT 2012 Rank 19 Aligned Residues 152 % Identity 11% Template c3lpnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of the phosphoribosylpyrophosphate (prpp) synthetase2 from thermoplasma volcanium in complex with an atp analog (ampcpp). Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.														.	.	.
Predicted Secondary structure																																																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	F	K	A	E	P	D	A	G	M	L	A	E	K	E	W	Q	A	A	A	Q	G	K	S	G	P	D	I	S	L	L	R	S	L	L	G	A	D	E	Q	A	A	A	A	L	L	L	A	Q	R	.	.	K	N	G	T	P	M	S	L	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	G
Query Conservation																																																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.									.																													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.									.
Template Sequence		P	D	E	R	R	F	P	D	.	.	.	.	.	.	G	E	L	Y	L	R	Y	D	.	E	D	L	T	G	H	N	I	F	I	I	G	N	T	H	S	D	A	E	V	M	E	M	I	L	T	L	S	A	I	Q	D	Y	R	T	K	S	V	N	I	I	A	P	Y	Y	G	Y	A	R	Q	H	Q	R	Y	K	N	G
Template Known Secondary structure								T	T	.	.	.	.	.	.	S								.	S			T	T	S										S														G	G	G	S			S							S	S		T	T	T	T			S		S	S	T	T
Template Predicted Secondary structure										.	.	.	.	.	.									.
Template SS confidence
		27	.	.	30	.	.	.	.							.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.
Query Sequence		D	E	R	A	L	H	W	L	R	Y	L	M	A	L	G	F	E	E	A	V	L	L	E	T	A	A	D	L	R	F	A	P	E	F	.	.	.	.	.	.	.	V	A	R	H	I	A	E	W	Q	H	Q	N	P	L	D	L	I	I	T	G	C	Q	S	S	E	G	Q	N	G	Q	T	P	F	L	L	A	E	M	L
Query Conservation																																				.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		E	P	I	S	S	Q	I	L	T	E	I	Y	S	S	Y	S	N	S	I	A	T	V	D	I	H	D	E	K	T	L	S	Y	S	K	V	K	F	S	D	L	H	A	N	D	A	I	V	R	Y	Y	K	N	V	D	V	D	Y	V	V	.	.	.	.	S	P	D	D	G	G	L	A	R	V	A	D	I	S	A	K	L
Template Known Secondary structure																T		S						S		S	S	G	G	G	G	G	G		S	S																T	T	S			S				.	.	.	.		S	S	S	S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	P	C	F	T	Q	V	E	R	F	T	L	D	A	L	F	I	T	L	E	Q	R	T	E	H
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		G	K	K	H	F	.	F	I	E	K	K	R	I	D	D	R	T	V	E	M	K	V	P	N	V	D
Template Known Secondary structure		T					.								T	T								S
Template Predicted Secondary structure							.
Template SS confidence
		176	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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