Return to main results Retrieve Phyre Job Id

Job DescriptionQ46908
Confidence78.25%DateThu Jan 5 12:35:46 GMT 2012
Rank26Aligned Residues97
% Identity19%Templatec3hgmD_
PDB info PDB header:signaling proteinChain: D: PDB Molecule:universal stress protein tead; PDBTitle: universal stress protein tead from the trap transporter2 teaabc of halomonas elongata
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70 .........80.........90.......
Predicted Secondary structure 







......................








Query SS confidence 






























. . . . . . . . . . . . . . . . . . . . . .


























Query Sequence  LGADEQAAAALLLAQRKNGTPMSLTALSMGD. . . . . . . . . . . . . . . . . . . . . . ERALHWLRYLMALGFEEAVLLETAADL
Query Conservation 
  
  


 





  
    

 

 
 ......................      

 


 


 

 
 
    
Alig confidence 



















..








......................


























Template Conservation 
  
  
   
  

     .. 
                                                     
  
Template Sequence  SKGAVKALEKGVGLQQLTGA. . ELYILCVFKHASLSMARPQLDIPDDALKDYATEIAVQAKTRATELGVPADKVRAFVKG
Template Known Secondary structure  ST
..




SS







TT

GGG
Template Predicted Secondary structure 



..




















Template SS confidence 















































































   12.......20.........30. ........40.........50.........60.........70.........80.........
 
   98.100.........110.........120.........130.........140..
Predicted Secondary structure 

















Query SS confidence 












































Query Sequence  RFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEML
Query Conservation    
   

  

   
    



 
  
 
   
 
   

  
Alig confidence 

....






































Template Conservation 
 ....    
   
     



 
            

    
Template Sequence  GR. . . . PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRV
Template Known Secondary structure  S
....TT
S
SS
TT

SSS


Template Predicted Secondary structure 

....















Template SS confidence 












































   96. ..100.........110.........120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions