Return to main results Retrieve Phyre Job Id

Job DescriptionQ46908
Confidence22.36%DateThu Jan 5 12:35:46 GMT 2012
Rank137Aligned Residues101
% Identity18%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60......... 70.........80.........90.........100.........110.......
Predicted Secondary structure 





.....















Query SS confidence 


























. . . . .















































Query Sequence  DEQAAAALLLAQRKNGTPMSLTALSMG. . . . . DERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPL
Query Conservation 
  


 





  
    

 

 
.....       

 


 


 

 
 
      
   

  

   
    
Alig confidence 


























.....

















.






.

















..
Template Conservation          
  

  
  
   
          
     
  
   


 .
 
 

 .
   
  
  

  

  .. 
Template Sequence  DVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDS. IALKDMA. GILTPYAAEELVSTLKKQ. . V
Template Known Secondary structure 
T




TT

TT
S.SS.S


..S
Template Predicted Secondary structure 













.



.



..
Template SS confidence 















































































   125....130.........140.........150.........160.........170.... .....180. ........190......... 200
 
   118.120.........130.........140.......
Predicted Secondary structure 














Query SS confidence 





























Query Sequence  DLIITGCQSSEGQNGQTPFLLAEMLGWPCF
Query Conservation 



 
  
 
   
 
   

  

 
 
Alig confidence 





























Template Conservation   
 
  
 


 


 

 



 


  
Template Sequence  DVELHLHCHSTAGLADMTLLKAIEAGVDRV
Template Known Secondary structure 
S


TTS
TT
S
Template Predicted Secondary structure 









Template SS confidence 





























   201........210.........220.........230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions