Job Description Q46908 Confidence 61.33% Date Thu Jan 5 12:35:46 GMT 2012 Rank 41 Aligned Residues 73 % Identity 15% Template c1zq1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi Resolution 3.00 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																															.																							.	.	.	.	.	.
Query SS confidence																															.																							.	.	.	.	.	.
Query Sequence		H	W	L	R	Y	L	M	A	L	G	F	E	E	A	V	L	L	E	T	A	A	D	L	R	F	A	P	E	F	.	V	A	R	H	I	A	E	W	Q	H	Q	N	P	L	D	L	I	I	T	G	C	Q	.	.	.	.	.	.	S	S	E	G	Q	N	G	Q	T	P	F	L	L	A	E	M	L	G	W	P	C	F
Query Conservation																															.																							.	.	.	.	.	.
Alig confidence														.						.	.	.	.								.																							.	.	.	.	.	.
Template Conservation														.						.	.	.	.
Template Sequence		H	E	V	A	K	A	L	N	S	G	D	Y	.	G	V	V	V	A	.	.	.	.	H	G	T	D	T	X	G	Y	T	A	A	A	L	S	F	X	L	R	N	L	G	K	P	V	V	L	V	G	A	Q	R	S	S	D	R	P	S	S	D	A	A	X	N	L	I	C	S	V	R	X	A	T	S	E	V	A	E	V
Template Known Secondary structure											T		S	.						.	.	.	.			T	T	T												S	B	T			S								S	S		T	T	S	T	T		S													T	S	S	B		S
Template Predicted Secondary structure														.						.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		148	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	V	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	V	V	X	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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